BioEducation

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List of courses and tutorials conducted by institutions in Singapore, course descriptions, and institutions offering them.


Name

Description

Institution offering the course

 LSM2104 Essential Bioinformatics and Biocomputing

LSM2104 Essentials Bioinformatics and Biocomputing is a core module offered to undergraduate students in Life Sciences program at National University of Singapore. This module serves as an introductory module that cover: biological databases and bioinformatics software, sequence comparison algorithms and tools, sequence analysis and molecular phylogenetics, biomolecular 3D structure and modeling. Both the theorical concepts and practical applications are highlighted through lectures, online webcasting, student mini-projects, student presentations, continual assessments, and hands-on practicals. This module is a pre-requisite to the module LSM3241 Bioinformatics and Biocomputing.

LSM3241 Bioinformatics and Biocomputing 

LSM3241 Bioinformatics and Biocomputing is an elective module offered to undergraduate students in Life Sciences program at National University of Singapore. Students have to pass the LSM2104 Essentials Bioinformatics and Biocomputing to read this module. Advanced bioinformatics are covered in this module and more emphasize is put on the hands-on application of concepts. Student projects including setting up webservers from scratch using BioSlax Live CD, collection of pathogens sequence data, processing and organization of collected data, sequence analysis and immunoinformatics study, and creation of specialized databases. In addition, this module also introduces problem-based learning (PBL) learning method, with the aim of training students to be an independent researcher who are able to acquire, process, and learn necessary information to solve a real-life problem. These skill sets are necessary with the rapid growth of information and knowledge, especially in the field of bioinformatics.

NUS

 

Bioinformatics Lectures in MDG5101 Advanced Cell Biology

Bioinformatics is integrated as a component in this module, whereby graduate students are introduced on the use and application of bioinformatics resources and tools in cell biology research.

NUS

BI5002 Introduction to Bioinformatics

The S*(S-Star) group of teaching institutions have formed a global alliance to provide a global, unified bioinformatics learning environment (GLOBULE) made up of modular courses in the disciplines of genomics, bioinformatics, and medical informatics.

S-Star :
Macquarie University, Australia,
University of Sydney, Australia,
Karolinska Institutet, Sweden,
University of Uppsala, Sweden,
National University of Singapore, Singapore,
University of the Western Cape, South Africa,
Stanford University, USA
University of California, San Diego , USA


MSc (Bioinformatics)


 

This course offers a 2-year part-time training programme leading to a M.Sc. The course is designed for students who have relevant scientific and technical background to upgrade themselves and stay relevant to the 4th pillar of the Singapore economy - Biomedical Sciences. The curriculum will provide them with a skill-set for the creation of excellent, well-validated methods for solving problems in the domain of bioinformatics and related fields that will emerge as a consequence of Singapore’s drive in Biomedical Sciences research. The curriculum will cover biology; significant coursework in algorithms; biostatistics, probability; data analysis and data mining; a substantial number of computer related skills, information technology, and seminars.

NTU

PhD (Bioinformatics) The PhD programme is targeted towards providing multi-disciplinary training in areas that fall within the research focus of BII.  The students will be jointly supervised by the BII scientists, in collaboration with colleagues in its sister research institutes and/or academics in the following universities: National University of Singapore (NUS); Nanyang Technological University (NTU); Imperial College London, University of Illinois, Urbana-Champaign; Karolinska Institutet, Sweden; and University of Dundee, Scotland. BII
CS2220 Computation Foundation in Bioinformatics
A module offered by School of Computing, National University of Singapore. The lectures cover: Data Mining Experiment Basics, Gene Feature Recognition, and Microarray and Proteomic Data Analysis.

NUS

 BI6106 Algorithms for Bioinformatics  A module offered by School of Computer Engineering, Nanyang Technological University.
NTU
BI6103 Computational Biology
A module offered by School of Computer Engineering, Nanyang Technological University. The lectures cover: recognition of gene and protein features.
NTU
From Data Mining to Bioinformatics A lecture for CS5228 Knowledge Discovery & Dataming, offered at the National University of Singapore NUS
Recognition of Gene Features A lecture for BI6103 Computational Biology, offered at the Nanyang Technological University NTU
Bioinformatics for Molecular Medicine & Cell Biology with Advanced Current Topics A lecture for NUS-Karolinska Institute graduate course. NUS
Guilt by Association A lecture for CS6280 Special Topics in Computer Science on Computational Systems Biology, offered at National University of Singapore.
NUS
Invariants Underlying Relational Databases and Queries A lecture for CS2306S Problem Solving in Computing II, offered at National University of Singapore
NUS
Manisfestation and Exploitation of Invariants in Bioinformatics A lecture for students under University Scholars Programme, National University of Singapore NUS
DNA Sequence Controls Expression Of Gene Involved In Cancer A student project presentation for the bioinformatics component in MDG5101 Advanced Cell Biology. NUS
DNA Sequence Controls Expression Of Gene Involved In Cancer 2
A student project presentation for the bioinformatics component in MDG5101 Advanced Cell Biology. NUS
DNA Sequence Controls Expression Of Gene Involved In Cancer 2
A student project presentation for the bioinformatics component in MDG5101 Advanced Cell Biology. NUS
Bioinformatics of Avian Influenza Virus A student project presentation for the bioinformatics component in MDG5101 Advanced Cell Biology. NUS
Bioinformatics of Avian Influenza Virus 2
A student project presentation for the bioinformatics component in MDG5101 Advanced Cell Biology. NUS
Annotation of Chlamydia trachomatis Genome A student project presentation for the bioinformatics component in MDG5101 Advanced Cell Biology. NUS
Prion Evolution: Structural Connection A student project presentation for the bioinformatics component in MDG5101 Advanced Cell Biology. NUS
Survey of Bioinformatics Databases A student project report for LSM2104 Essential Bioinformatics and Biocomputing NUS
Survey  of Bioinformatics Databases 2 A student project report for LSM2104 Essential Bioinformatics and Biocomputing NUS
Survey of Bioinformatics Databases 3 A student project report for LSM2104 Essential Bioinformatics and Biocomputing NUS
Survey of Bioinformatics Databases 4 A student project report for LSM2104 Essential Bioinformatics and Biocomputing NUS
Survey of Bioinformatics Software and Web Services A student project report for LSM2104 Essential Bioinformatics and Biocomputing NUS
Survey of Bioinformatics Software and Web Services 2
A student project report for LSM2104 Essential Bioinformatics and Biocomputing NUS
Survey of Bioinformatics Software and Web Services 3
A student project report for LSM2104 Essential Bioinformatics and Biocomputing NUS
Survey of Bioinformatics Software and Web Services 4
A student project report for LSM2104 Essential Bioinformatics and Biocomputing NUS
Biological Sequence Comparison A student project report for LSM2104 Essential Bioinformatics and Biocomputing NUS
Biological Sequence Comparison 2
A student project report for LSM2104 Essential Bioinformatics and Biocomputing NUS
Biological Sequence Comparison 3
A student project report for LSM2104 Essential Bioinformatics and Biocomputing NUS
Biological Sequence Comparison 4
A student project report for LSM2104 Essential Bioinformatics and Biocomputing NUS
Biological Sequence Search A student project report for LSM2104 Essential Bioinformatics and Biocomputing
 NUS
Biological Sequence Search 2
 A student project report for LSM2104 Essential Bioinformatics and Biocomputing  NUS
Biological Sequence Search 3
 A student project report for LSM2104 Essential Bioinformatics and Biocomputing  NUS
Biological Sequence Search 4
 A student project report for LSM2104 Essential Bioinformatics and Biocomputing  NUS
Biological Patterns and Motifs  A student project report for LSM2104 Essential Bioinformatics and Biocomputing  NUS
Biological Patterns and Motifs 2
 A student project report for LSM2104 Essential Bioinformatics and Biocomputing  NUS
Biological Patterns and Motifs 3
 A student project report for LSM2104 Essential Bioinformatics and Biocomputing  NUS
Biological Patterns and Motifs 4
 A student project report for LSM2104 Essential Bioinformatics and Biocomputing  NUS
Multiple Sequence Alignments and Molecular Phylogenetics  A student project report for LSM2104 Essential Bioinformatics and Biocomputing  NUS
Multiple Sequence Alignments and Molecular Phylogenetics 2
 A student project report for LSM2104 Essential Bioinformatics and Biocomputing  NUS
Multiple Sequence Alignments and Molecular Phylogenetics 3
 A student project report for LSM2104 Essential Bioinformatics and Biocomputing  NUS
Multiple Sequence Alignments and Molecular Phylogenetics 4
 A student project report for LSM2104 Essential Bioinformatics and Biocomputing  NUS
Folding problem and Fundamentals of Structural Biology and Visualisation A student project report for LSM2104 Essential Bioinformatics and Biocomputing NUS
Folding problem and Fundamentals of Structural Biology and Visualisation 2
A student project report for LSM2104 Essential Bioinformatics and Biocomputing NUS
Folding problem and Fundamentals of Structural Biology and Visualisation 3
A student project report for LSM2104 Essential Bioinformatics and Biocomputing NUS
Folding problem and Fundamentals of Structural Biology and Visualisation 4
A student project report for LSM2104 Essential Bioinformatics and Biocomputing NUS
Protein structure: databases, visualization, and classification A student project report for LSM2104 Essential Bioinformatics and Biocomputing NUS
Protein structure: databases, visualization, and classification 2
A student project report for LSM2104 Essential Bioinformatics and Biocomputing NUS
Protein structure: databases, visualization, and classification 3
A student project report for LSM2104 Essential Bioinformatics and Biocomputing NUS
Protein structure: databases, visualization, and classification 4
A student project report for LSM2104 Essential Bioinformatics and Biocomputing NUS
Protein Structural Modelling and Prediction A student project report for LSM2104 Essential Bioinformatics and Biocomputing NUS
Protein Structural Modelling and Prediction 2
A student project report for LSM2104 Essential Bioinformatics and Biocomputing NUS
Protein Structural Modelling and Prediction 3
A student project report for LSM2104 Essential Bioinformatics and Biocomputing NUS
Protein Structural Modelling and Prediction 4
A student project report for LSM2104 Essential Bioinformatics and Biocomputing NUS
Creation of Dengue Virus Serotype 2 Database A student project products for LSM3241 Bioinformatics and Biocomputing NUS
Creation of HIV Database A student project products for LSM3241 Bioinformatics and Biocomputing NUS
Building Databases A student project products for LSM3241 Bioinformatics and Biocomputing NUS
Creation of West Nile Database A student project products for LSM3241 Bioinformatics and Biocomputing NUS


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